Problem with repo config file after restore GitLab backup

Hello,

Currently, in my company we’are using GitLab CE version14.1.2 . We are supposed to upgrade our GitLab on latest version and decided to use GitLab in Docker Container. I have launched GitLab into docker container, the same version as it is in our product env - 14.1.2 ce. After I’d restored gitlab backup file I noticed that there is some parts of config file in project repo directiory (for example gitlab.fullpath).
Our script for mirroring is based on variables which values are provided from config file, so it menas it doesn’t work now. Difference beetwen config file in container and our current gitlab you can see in attachment.